Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lsan_0677 | Lsan_0678 | Lsan_0677 | Lsan_0678 | Regulatory protein (GGDEF domain). | Hypothetical protein. | 0.957 |
Lsan_0677 | Lsan_0679 | Lsan_0677 | Lsan_0679 | Regulatory protein (GGDEF domain). | Hypothetical protein. | 0.964 |
Lsan_0677 | Lsan_0680 | Lsan_0677 | Lsan_0680 | Regulatory protein (GGDEF domain). | FIST N domain protein. | 0.841 |
Lsan_0677 | Lsan_0684 | Lsan_0677 | Lsan_0684 | Regulatory protein (GGDEF domain). | Outer membrane efflux protein. | 0.454 |
Lsan_0677 | mdtA | Lsan_0677 | Lsan_0681 | Regulatory protein (GGDEF domain). | Multidrug efflux system, subunit A; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.483 |
Lsan_0677 | mdtB | Lsan_0677 | Lsan_0682 | Regulatory protein (GGDEF domain). | Multidrug efflux system, subunit B; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.456 |
Lsan_0677 | mdtC | Lsan_0677 | Lsan_0683 | Regulatory protein (GGDEF domain). | Multidrug efflux system, subunit C; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.456 |
Lsan_0677 | stuC | Lsan_0677 | Lsan_0976 | Regulatory protein (GGDEF domain). | Sensor histidine kinase. | 0.999 |
Lsan_0678 | Lsan_0677 | Lsan_0678 | Lsan_0677 | Hypothetical protein. | Regulatory protein (GGDEF domain). | 0.957 |
Lsan_0678 | Lsan_0679 | Lsan_0678 | Lsan_0679 | Hypothetical protein. | Hypothetical protein. | 0.967 |
Lsan_0678 | Lsan_0680 | Lsan_0678 | Lsan_0680 | Hypothetical protein. | FIST N domain protein. | 0.811 |
Lsan_0678 | Lsan_0684 | Lsan_0678 | Lsan_0684 | Hypothetical protein. | Outer membrane efflux protein. | 0.462 |
Lsan_0678 | mdtA | Lsan_0678 | Lsan_0681 | Hypothetical protein. | Multidrug efflux system, subunit A; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.462 |
Lsan_0678 | mdtB | Lsan_0678 | Lsan_0682 | Hypothetical protein. | Multidrug efflux system, subunit B; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.462 |
Lsan_0678 | mdtC | Lsan_0678 | Lsan_0683 | Hypothetical protein. | Multidrug efflux system, subunit C; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.462 |
Lsan_0678 | stuC | Lsan_0678 | Lsan_0976 | Hypothetical protein. | Sensor histidine kinase. | 0.967 |
Lsan_0679 | Lsan_0677 | Lsan_0679 | Lsan_0677 | Hypothetical protein. | Regulatory protein (GGDEF domain). | 0.964 |
Lsan_0679 | Lsan_0678 | Lsan_0679 | Lsan_0678 | Hypothetical protein. | Hypothetical protein. | 0.967 |
Lsan_0679 | Lsan_0680 | Lsan_0679 | Lsan_0680 | Hypothetical protein. | FIST N domain protein. | 0.814 |
Lsan_0679 | Lsan_0684 | Lsan_0679 | Lsan_0684 | Hypothetical protein. | Outer membrane efflux protein. | 0.462 |
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