STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lsan_1069D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase. (596 aa)    
Predicted Functional Partners:
Lsan_0597
LD-carboxypeptidase.
 
  
 0.937
Lsan_2057
Enhanced entry protein EnhA.
  
  
  0.922
Lsan_0195
Hypothetical protein.
  
  
  0.918
enhA_3
Enhanced entry protein EnhA.
  
  
  0.916
Lsan_1979
Enhanced entry protein EnhA.
  
  
  0.913
enhA_2
Enhanced entry protein EnhA.
  
  
  0.911
ftsI
Transpeptidase involved in septal peptidoglycan synthesis (penicillin-binding protein 3); Catalyzes cross-linking of the peptidoglycan cell wall at the division septum.
     
 0.878
dacA
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5); Belongs to the peptidase S11 family.
     
 0.878
Lsan_3404
D-Ala-D-Ala carboxypeptidase.
  
  
 
0.875
mrcA
Putative peptidoglycan synthetase, penicillin-binding protein 1A.
     
 0.872
Your Current Organism:
Legionella santicrucis
NCBI taxonomy Id: 45074
Other names: ATCC 35301, CCUG 29673, CIP 103849, DSM 23075, JCM 7557, L. santicrucis, Legionella sancticrucis, Legionella santacruxensis, NCTC 11989, strain SC-63-C7
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