STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lsan_1069D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase. (596 aa)    
Predicted Functional Partners:
Lsan_0597
LD-carboxypeptidase.
 
  
  0.762
Lsan_2057
Enhanced entry protein EnhA.
  
  
  0.712
Lsan_0195
Hypothetical protein.
  
  
  0.696
Lsan_3408
Hypothetical protein.
 
  
  0.692
Lsan_2124
Muramoyltetrapeptide carboxypeptidase.
 
  
  0.691
Lsan_2376
Muramoyltetrapeptide carboxypeptidase.
 
  
  0.691
enhA_3
Enhanced entry protein EnhA.
  
  
  0.689
Lsan_1979
Enhanced entry protein EnhA.
  
  
  0.677
parB_2
Partition protein ParB; Belongs to the ParB family.
       0.674
Lsan_1070
Sphingomyelin phosphodiesterase.
 
     0.671
Your Current Organism:
Legionella santicrucis
NCBI taxonomy Id: 45074
Other names: ATCC 35301, CCUG 29673, CIP 103849, DSM 23075, JCM 7557, L. santicrucis, Legionella sancticrucis, Legionella santacruxensis, NCTC 11989, strain SC-63-C7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.