Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lsan_1490 | Lsan_1491 | Lsan_1490 | Lsan_1491 | Putative Heparan-alpha-glucosaminide N-acetyltransferase. | Zinc ribbon domain protein. | 0.444 |
Lsan_1490 | Lsan_1492 | Lsan_1490 | Lsan_1492 | Putative Heparan-alpha-glucosaminide N-acetyltransferase. | Transmembrane protein. | 0.426 |
Lsan_1490 | aspS | Lsan_1490 | Lsan_1493 | Putative Heparan-alpha-glucosaminide N-acetyltransferase. | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.411 |
Lsan_1491 | Lsan_1490 | Lsan_1491 | Lsan_1490 | Zinc ribbon domain protein. | Putative Heparan-alpha-glucosaminide N-acetyltransferase. | 0.444 |
Lsan_1491 | Lsan_1492 | Lsan_1491 | Lsan_1492 | Zinc ribbon domain protein. | Transmembrane protein. | 0.793 |
Lsan_1491 | Lsan_1494 | Lsan_1491 | Lsan_1494 | Zinc ribbon domain protein. | Mechanosensitive ion channel MscS. | 0.667 |
Lsan_1491 | aspS | Lsan_1491 | Lsan_1493 | Zinc ribbon domain protein. | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.724 |
Lsan_1491 | mutH | Lsan_1491 | Lsan_1495 | Zinc ribbon domain protein. | DNA mismatch repair protein mutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences. It is involved in DNA mismatch repair. Belongs to the MutH family. | 0.648 |
Lsan_1492 | Lsan_1490 | Lsan_1492 | Lsan_1490 | Transmembrane protein. | Putative Heparan-alpha-glucosaminide N-acetyltransferase. | 0.426 |
Lsan_1492 | Lsan_1491 | Lsan_1492 | Lsan_1491 | Transmembrane protein. | Zinc ribbon domain protein. | 0.793 |
Lsan_1492 | Lsan_1494 | Lsan_1492 | Lsan_1494 | Transmembrane protein. | Mechanosensitive ion channel MscS. | 0.667 |
Lsan_1492 | aspS | Lsan_1492 | Lsan_1493 | Transmembrane protein. | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.724 |
Lsan_1492 | mutH | Lsan_1492 | Lsan_1495 | Transmembrane protein. | DNA mismatch repair protein mutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences. It is involved in DNA mismatch repair. Belongs to the MutH family. | 0.648 |
Lsan_1494 | Lsan_1491 | Lsan_1494 | Lsan_1491 | Mechanosensitive ion channel MscS. | Zinc ribbon domain protein. | 0.667 |
Lsan_1494 | Lsan_1492 | Lsan_1494 | Lsan_1492 | Mechanosensitive ion channel MscS. | Transmembrane protein. | 0.667 |
Lsan_1494 | aspS | Lsan_1494 | Lsan_1493 | Mechanosensitive ion channel MscS. | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.723 |
Lsan_1494 | mutH | Lsan_1494 | Lsan_1495 | Mechanosensitive ion channel MscS. | DNA mismatch repair protein mutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences. It is involved in DNA mismatch repair. Belongs to the MutH family. | 0.822 |
aspS | Lsan_1490 | Lsan_1493 | Lsan_1490 | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | Putative Heparan-alpha-glucosaminide N-acetyltransferase. | 0.411 |
aspS | Lsan_1491 | Lsan_1493 | Lsan_1491 | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | Zinc ribbon domain protein. | 0.724 |
aspS | Lsan_1492 | Lsan_1493 | Lsan_1492 | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | Transmembrane protein. | 0.724 |
page 1 of 2