STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lsan_1792Hypothetical protein. (167 aa)    
Predicted Functional Partners:
Lsan_1793
Nucleotidyltransferase domain protein.
       0.793
Lsan_1794
Putative type I restriction enzyme R protein; Subunit R is required for both nuclease and ATPase activities, but not for modification.
       0.791
Lsan_1791
Putative type-I restriction enzyme specificity protein.
       0.790
Lsan_1795
Zinc metalloprotease.
       0.775
Lsan_1790
DNA-damage-inducible protein D.
       0.774
Lsan_1796
Hypothetical protein.
       0.576
Lsan_1797
Hypothetical protein.
       0.576
Lsan_1789
Putative type I restriction enzyme M protein.
       0.538
Lsan_1788
EcoKI restriction-modification system protein HsdS.
       0.494
Your Current Organism:
Legionella santicrucis
NCBI taxonomy Id: 45074
Other names: ATCC 35301, CCUG 29673, CIP 103849, DSM 23075, JCM 7557, L. santicrucis, Legionella sancticrucis, Legionella santacruxensis, NCTC 11989, strain SC-63-C7
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