Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Lsan_1788 | Lsan_1789 | EcoKI restriction-modification system protein HsdS. | Putative type I restriction enzyme M protein. | 0.998 |
Lsan_1788 | Lsan_1790 | EcoKI restriction-modification system protein HsdS. | DNA-damage-inducible protein D. | 0.611 |
Lsan_1788 | Lsan_1791 | EcoKI restriction-modification system protein HsdS. | Putative type-I restriction enzyme specificity protein. | 0.885 |
Lsan_1788 | Lsan_1792 | EcoKI restriction-modification system protein HsdS. | Hypothetical protein. | 0.494 |
Lsan_1788 | Lsan_1793 | EcoKI restriction-modification system protein HsdS. | Nucleotidyltransferase domain protein. | 0.574 |
Lsan_1788 | Lsan_1794 | EcoKI restriction-modification system protein HsdS. | Putative type I restriction enzyme R protein; Subunit R is required for both nuclease and ATPase activities, but not for modification. | 0.974 |
Lsan_1788 | Lsan_1795 | EcoKI restriction-modification system protein HsdS. | Zinc metalloprotease. | 0.878 |
Lsan_1789 | Lsan_1788 | Putative type I restriction enzyme M protein. | EcoKI restriction-modification system protein HsdS. | 0.998 |
Lsan_1789 | Lsan_1790 | Putative type I restriction enzyme M protein. | DNA-damage-inducible protein D. | 0.676 |
Lsan_1789 | Lsan_1791 | Putative type I restriction enzyme M protein. | Putative type-I restriction enzyme specificity protein. | 0.998 |
Lsan_1789 | Lsan_1792 | Putative type I restriction enzyme M protein. | Hypothetical protein. | 0.538 |
Lsan_1789 | Lsan_1793 | Putative type I restriction enzyme M protein. | Nucleotidyltransferase domain protein. | 0.562 |
Lsan_1789 | Lsan_1794 | Putative type I restriction enzyme M protein. | Putative type I restriction enzyme R protein; Subunit R is required for both nuclease and ATPase activities, but not for modification. | 0.998 |
Lsan_1789 | Lsan_1795 | Putative type I restriction enzyme M protein. | Zinc metalloprotease. | 0.893 |
Lsan_1789 | Lsan_1796 | Putative type I restriction enzyme M protein. | Hypothetical protein. | 0.400 |
Lsan_1789 | Lsan_1797 | Putative type I restriction enzyme M protein. | Hypothetical protein. | 0.400 |
Lsan_1790 | Lsan_1788 | DNA-damage-inducible protein D. | EcoKI restriction-modification system protein HsdS. | 0.611 |
Lsan_1790 | Lsan_1789 | DNA-damage-inducible protein D. | Putative type I restriction enzyme M protein. | 0.676 |
Lsan_1790 | Lsan_1791 | DNA-damage-inducible protein D. | Putative type-I restriction enzyme specificity protein. | 0.833 |
Lsan_1790 | Lsan_1792 | DNA-damage-inducible protein D. | Hypothetical protein. | 0.774 |
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