STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lsan_2007ATPase. (179 aa)    
Predicted Functional Partners:
Lsan_2006
Hypothetical protein.
       0.774
Lsan_2008
class-D beta-lactamase.
       0.773
Lsan_2009
GNAT family acetyltransferase.
 
     0.602
Lsan_2853
Hypothetical protein.
  
     0.502
Lsan_2420
GNAT family acetyltransferase.
 
     0.496
Lsan_2010
Methyltransferase.
       0.491
Lsan_2005
Hypothetical protein.
       0.469
Lsan_2379
Aminoalkylphosphonic acid N-acetyltransferase.
  
     0.469
Your Current Organism:
Legionella santicrucis
NCBI taxonomy Id: 45074
Other names: ATCC 35301, CCUG 29673, CIP 103849, DSM 23075, JCM 7557, L. santicrucis, Legionella sancticrucis, Legionella santacruxensis, NCTC 11989, strain SC-63-C7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.