STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lsan_2085Methoxymalonyl CoA synthase. (281 aa)    
Predicted Functional Partners:
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
  
 
 0.940
Lsan_2086
Pyoverdine biosynthesis regulatory protein SyrP-like protein.
 
     0.817
cloSI
Clostripain precursor.
 
     0.734
Lsan_0399
Putative Glutathione synthetase ATP-binding domain-like protein.
  
     0.733
Lsan_2087
Helicase, DEAD/DEAH box family.
       0.719
Lsan_3135
Conserved protein of unknown function.
  
     0.675
Lsan_3412
Ankyrin repeat protein.
  
     0.669
Lsan_0061
U-box domain protein.
  
     0.667
Lsan_1117
Hypothetical protein.
  
     0.667
Lsan_1106
Acylaminoacyl peptidase.
 
     0.624
Your Current Organism:
Legionella santicrucis
NCBI taxonomy Id: 45074
Other names: ATCC 35301, CCUG 29673, CIP 103849, DSM 23075, JCM 7557, L. santicrucis, Legionella sancticrucis, Legionella santacruxensis, NCTC 11989, strain SC-63-C7
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