STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lsan_2330Putative conjugative transfer protein TraF. (260 aa)    
Predicted Functional Partners:
msrA_1
Bifunctional methionine sulfoxide reductase B/A protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.983
Lsan_2331
Conjugal transfer mating pair stabilization protein TraN.
 
     0.951
Lsan_2332
Putative conjugative transfer protein TrbC.
 
     0.951
Lsan_2329
Putative conjugative transfer protein TrbB.
 
     0.949
Lsan_2327
Putative sex pilus assembly and mating pair protein TraG.
 
     0.948
Lsan_2328
Putative conjugative transfer protein TraH.
 
     0.948
Lsan_2334
Putative conjugative transfer protein TraW.
 
     0.948
Lsan_2336
Putative conjugative transfer protein TraC.
 
     0.948
Lsan_2333
Putative conjugative transfer protein TraU.
 
     0.946
Lsan_2338
Putative conjugative transfer protein TraB.
 
     0.927
Your Current Organism:
Legionella santicrucis
NCBI taxonomy Id: 45074
Other names: ATCC 35301, CCUG 29673, CIP 103849, DSM 23075, JCM 7557, L. santicrucis, Legionella sancticrucis, Legionella santacruxensis, NCTC 11989, strain SC-63-C7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.