STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lsan_2418ATPase. (190 aa)    
Predicted Functional Partners:
Lsan_2422
Multifunctional nucleotidyltransferase/glutamate rich protein GrpB/ribosomal protein alanine acetyltransferase.
 
     0.915
Lsan_2420
GNAT family acetyltransferase.
 
     0.902
Lsan_2423
Multidrug resistance ABC transporter ATP binding protein.
 
     0.821
grpB_2
Glutamate rich protein GrpB.
 
     0.816
uup_3
ABC transporter ATP-binding protein Uup.
 
     0.813
Lsan_2419
Hypothetical protein.
       0.783
Lsan_2416
Putative secreted esterase.
 
     0.717
Lsan_2365
Aminoglycoside 6'-N-acetyltransferase.
  
     0.690
Lsan_2324
Putative conjugative transfer protein TraI.
  
     0.640
Lsan_2414
Cell division protein FtsI/penicillin-binding protein 2.
 
     0.631
Your Current Organism:
Legionella santicrucis
NCBI taxonomy Id: 45074
Other names: ATCC 35301, CCUG 29673, CIP 103849, DSM 23075, JCM 7557, L. santicrucis, Legionella sancticrucis, Legionella santacruxensis, NCTC 11989, strain SC-63-C7
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