STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lsan_2425Sensory box/GGDEF family protein. (279 aa)    
Predicted Functional Partners:
stuC
Sensor histidine kinase.
  
 0.992
Lsan_0904
Sensory histidine-kinase / response regulator.
 0.988
Lsan_3538
Regulatory protein (EAL domain).
 0.988
letS
Legionella transmission sensor LetS.
 0.987
Lsan_3987
Sensory box histidine kinase/response regulator.
 0.986
Lsan_0677
Regulatory protein (GGDEF domain).
 
0.980
Lsan_1173
Regulatory protein (GGDEF and EAL domains).
 
0.980
Lsan_2655
Regulatory protein (EAL domain).
 
   
 0.976
Lsan_2030
Metal dependent phosphohydrolase.
 0.968
Lsan_1238
LuxR family transcriptional regulator.
  
 0.963
Your Current Organism:
Legionella santicrucis
NCBI taxonomy Id: 45074
Other names: ATCC 35301, CCUG 29673, CIP 103849, DSM 23075, JCM 7557, L. santicrucis, Legionella sancticrucis, Legionella santacruxensis, NCTC 11989, strain SC-63-C7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.