STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lsan_2829Metal-dependent hydrolase. (233 aa)    
Predicted Functional Partners:
Lsan_2825
ATPase.
 
     0.618
Lsan_2830
Mercury resistance transcriptional regulator SkgA.
 
     0.607
Lsan_3127
Cupin domain protein.
  
    0.592
aacA4_3
Aminoglycoside N (6')-acetyltransferase.
 
     0.563
Lsan_2824
GNAT acetyltransferase.
       0.545
csaA_1
Chaperonin CsaA.
       0.545
Lsan_2827
Alpha/beta hydrolase family protein.
       0.545
blaZ
Beta-lactamase 3 precursor.
       0.545
Lsan_2844
Putative aminoglycoside phosphotransferase.
 
     0.545
Lsan_2849
Methyltransferase, ubiE/COQ5 family.
 
     0.495
Your Current Organism:
Legionella santicrucis
NCBI taxonomy Id: 45074
Other names: ATCC 35301, CCUG 29673, CIP 103849, DSM 23075, JCM 7557, L. santicrucis, Legionella sancticrucis, Legionella santacruxensis, NCTC 11989, strain SC-63-C7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.