Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lsan_3014 | Lsan_3015 | Lsan_3014 | Lsan_3015 | Hypothetical protein. | Hypothetical protein. | 0.553 |
Lsan_3015 | Lsan_3014 | Lsan_3015 | Lsan_3014 | Hypothetical protein. | Hypothetical protein. | 0.553 |
Lsan_3015 | Lsan_3209 | Lsan_3015 | Lsan_3209 | Hypothetical protein. | Phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase; Belongs to the UbiA prenyltransferase family. | 0.626 |
Lsan_3015 | Lsan_4211 | Lsan_3015 | Lsan_4211 | Hypothetical protein. | Chorismate mutase. | 0.702 |
Lsan_3015 | aas | Lsan_3015 | Lsan_3729 | Hypothetical protein. | Fused 2-acylglycerophospho-ethanolamine acyl transferase, acyl-acyl carrier protein synthetase. | 0.400 |
Lsan_3015 | aroA | Lsan_3015 | Lsan_0011 | Hypothetical protein. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.486 |
Lsan_3015 | trpD | Lsan_3015 | Lsan_2284 | Hypothetical protein. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.499 |
Lsan_3015 | trpE | Lsan_3015 | Lsan_3175 | Hypothetical protein. | Anthranilate synthase. | 0.688 |
Lsan_3209 | Lsan_3015 | Lsan_3209 | Lsan_3015 | Phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase; Belongs to the UbiA prenyltransferase family. | Hypothetical protein. | 0.626 |
Lsan_4211 | Lsan_3015 | Lsan_4211 | Lsan_3015 | Chorismate mutase. | Hypothetical protein. | 0.702 |
Lsan_4211 | aroA | Lsan_4211 | Lsan_0011 | Chorismate mutase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.955 |
Lsan_4211 | trpD | Lsan_4211 | Lsan_2284 | Chorismate mutase. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.787 |
Lsan_4211 | trpE | Lsan_4211 | Lsan_3175 | Chorismate mutase. | Anthranilate synthase. | 0.807 |
aas | Lsan_3015 | Lsan_3729 | Lsan_3015 | Fused 2-acylglycerophospho-ethanolamine acyl transferase, acyl-acyl carrier protein synthetase. | Hypothetical protein. | 0.400 |
aas | trpE | Lsan_3729 | Lsan_3175 | Fused 2-acylglycerophospho-ethanolamine acyl transferase, acyl-acyl carrier protein synthetase. | Anthranilate synthase. | 0.413 |
aroA | Lsan_3015 | Lsan_0011 | Lsan_3015 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Hypothetical protein. | 0.486 |
aroA | Lsan_4211 | Lsan_0011 | Lsan_4211 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Chorismate mutase. | 0.955 |
aroA | trpE | Lsan_0011 | Lsan_3175 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Anthranilate synthase. | 0.406 |
trpD | Lsan_3015 | Lsan_2284 | Lsan_3015 | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | Hypothetical protein. | 0.499 |
trpD | Lsan_4211 | Lsan_2284 | Lsan_4211 | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | Chorismate mutase. | 0.787 |
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