Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lsan_1052 | Lsan_1609 | Lsan_1052 | Lsan_1609 | acyl-CoA synthetase. | Pyruvate/2-oxoglutarate dehydrogenase subunit E1. | 0.875 |
Lsan_1052 | Lsan_2556 | Lsan_1052 | Lsan_2556 | acyl-CoA synthetase. | Non-ribosomal peptide synthetase/polyketide synthetase. | 0.999 |
Lsan_1052 | Lsan_3065 | Lsan_1052 | Lsan_3065 | acyl-CoA synthetase. | hydroxymethylglutaryl-CoA lyase. | 0.776 |
Lsan_1052 | Lsan_3067 | Lsan_1052 | Lsan_3067 | acyl-CoA synthetase. | enoyl-CoA hydratase. | 0.935 |
Lsan_1052 | Lsan_3068 | Lsan_1052 | Lsan_3068 | acyl-CoA synthetase. | Acetyl/propionyl-CoA carboxylase, beta subunit. | 0.825 |
Lsan_1052 | Lsan_3071 | Lsan_1052 | Lsan_3071 | acyl-CoA synthetase. | acyl-CoA dehydrogenase. | 0.936 |
Lsan_1052 | birA | Lsan_1052 | Lsan_2758 | acyl-CoA synthetase. | biotin-[acetylCoA carboxylase] holoenzyme synthetase and biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon. | 0.531 |
Lsan_1052 | fadB | Lsan_1052 | Lsan_1967 | acyl-CoA synthetase. | 3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.973 |
Lsan_1052 | mccA | Lsan_1052 | Lsan_3066 | acyl-CoA synthetase. | Acyl CoA carboxylase subunit alpha. | 0.821 |
Lsan_1052 | yfcX | Lsan_1052 | Lsan_1303 | acyl-CoA synthetase. | Enoyl CoA hydratase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.973 |
Lsan_1609 | Lsan_1052 | Lsan_1609 | Lsan_1052 | Pyruvate/2-oxoglutarate dehydrogenase subunit E1. | acyl-CoA synthetase. | 0.875 |
Lsan_1609 | Lsan_2556 | Lsan_1609 | Lsan_2556 | Pyruvate/2-oxoglutarate dehydrogenase subunit E1. | Non-ribosomal peptide synthetase/polyketide synthetase. | 0.849 |
Lsan_1609 | Lsan_3065 | Lsan_1609 | Lsan_3065 | Pyruvate/2-oxoglutarate dehydrogenase subunit E1. | hydroxymethylglutaryl-CoA lyase. | 0.748 |
Lsan_1609 | Lsan_3068 | Lsan_1609 | Lsan_3068 | Pyruvate/2-oxoglutarate dehydrogenase subunit E1. | Acetyl/propionyl-CoA carboxylase, beta subunit. | 0.842 |
Lsan_1609 | Lsan_3071 | Lsan_1609 | Lsan_3071 | Pyruvate/2-oxoglutarate dehydrogenase subunit E1. | acyl-CoA dehydrogenase. | 0.749 |
Lsan_1609 | birA | Lsan_1609 | Lsan_2758 | Pyruvate/2-oxoglutarate dehydrogenase subunit E1. | biotin-[acetylCoA carboxylase] holoenzyme synthetase and biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon. | 0.649 |
Lsan_1609 | fadB | Lsan_1609 | Lsan_1967 | Pyruvate/2-oxoglutarate dehydrogenase subunit E1. | 3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.469 |
Lsan_1609 | mccA | Lsan_1609 | Lsan_3066 | Pyruvate/2-oxoglutarate dehydrogenase subunit E1. | Acyl CoA carboxylase subunit alpha. | 0.883 |
Lsan_1609 | yfcX | Lsan_1609 | Lsan_1303 | Pyruvate/2-oxoglutarate dehydrogenase subunit E1. | Enoyl CoA hydratase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.469 |
Lsan_2556 | Lsan_1052 | Lsan_2556 | Lsan_1052 | Non-ribosomal peptide synthetase/polyketide synthetase. | acyl-CoA synthetase. | 0.999 |
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