STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lsan_3182ABC transporter ATP-binding protein. (219 aa)    
Predicted Functional Partners:
yecS
Transporter subunit: permease component of ABC superfamily transporter.
 0.999
yqiX
Amino acid ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
 0.976
Lsan_0755
ABC transporter permease.
 
  
  0.942
Lsan_1285
Glutamine-binding periplasmic protein precursor; Belongs to the bacterial solute-binding protein 3 family.
 
 0.932
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
  
 0.898
Lsan_4180
Putative amino acid ABC transporter, periplasmic binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
 0.884
artJ
Arginine ABC transporter substrate-binding protein.
 
 0.876
Lsan_0247
Arginine-binding periplasmic protein.
 
 0.868
Lsan_4120
Arginine-binding periplasmic protein.
 
 0.858
Lsan_0778
Arginine ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
 0.847
Your Current Organism:
Legionella santicrucis
NCBI taxonomy Id: 45074
Other names: ATCC 35301, CCUG 29673, CIP 103849, DSM 23075, JCM 7557, L. santicrucis, Legionella sancticrucis, Legionella santacruxensis, NCTC 11989, strain SC-63-C7
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