STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lsan_3208Hypothetical protein. (220 aa)    
Predicted Functional Partners:
Lsan_3207
Hypothetical protein.
      0.955
Lsan_3209
Phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase; Belongs to the UbiA prenyltransferase family.
 
  
 0.897
Lsan_3074
Putative Acetyltransferase, GNAT family.
  
     0.758
Lsan_1269
Hypothetical protein.
  
     0.757
Lsan_0167
NHL repeat protein.
  
  
 0.733
iraA
Small-molecule methyltransferase IraA.
  
     0.684
Lsan_3408
Hypothetical protein.
  
     0.641
Lsan_0692
Coiled-coil protein.
  
     0.635
Lsan_1618
CAAX amino terminal protease self- immunity.
  
     0.616
Lsan_1152
Fe-S protein.
  
     0.608
Your Current Organism:
Legionella santicrucis
NCBI taxonomy Id: 45074
Other names: ATCC 35301, CCUG 29673, CIP 103849, DSM 23075, JCM 7557, L. santicrucis, Legionella sancticrucis, Legionella santacruxensis, NCTC 11989, strain SC-63-C7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.