Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lsan_0004 | Lsan_0055 | Lsan_0004 | Lsan_0055 | Phospholipase, patatin family. | Hypothetical protein. | 0.771 |
Lsan_0004 | Lsan_1047 | Lsan_0004 | Lsan_1047 | Phospholipase, patatin family. | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase. | 0.778 |
Lsan_0004 | Lsan_1467 | Lsan_0004 | Lsan_1467 | Phospholipase, patatin family. | Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.770 |
Lsan_0004 | Lsan_2975 | Lsan_0004 | Lsan_2975 | Phospholipase, patatin family. | Calcium-transporting ATPase. | 0.772 |
Lsan_0004 | Lsan_3956 | Lsan_0004 | Lsan_3956 | Phospholipase, patatin family. | Putative secreted esterase. | 0.767 |
Lsan_0004 | Lsan_4188 | Lsan_0004 | Lsan_4188 | Phospholipase, patatin family. | Hypothetical protein. | 0.771 |
Lsan_0004 | bcp | Lsan_0004 | Lsan_3764 | Phospholipase, patatin family. | Acetylpolyamine aminohydrolase. | 0.766 |
Lsan_0004 | lepB_4 | Lsan_0004 | Lsan_2620 | Phospholipase, patatin family. | Effector protein B, substrate of the Dot/Icm secretion system. | 0.771 |
Lsan_0004 | pieE_2 | Lsan_0004 | Lsan_3286 | Phospholipase, patatin family. | Substrate of the Dot/Icm secretion system. | 0.772 |
Lsan_0004 | yeeA_1 | Lsan_0004 | Lsan_1097 | Phospholipase, patatin family. | Inner membrane protein. | 0.764 |
Lsan_0055 | Lsan_0004 | Lsan_0055 | Lsan_0004 | Hypothetical protein. | Phospholipase, patatin family. | 0.771 |
Lsan_0055 | Lsan_1047 | Lsan_0055 | Lsan_1047 | Hypothetical protein. | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase. | 0.774 |
Lsan_0055 | Lsan_1467 | Lsan_0055 | Lsan_1467 | Hypothetical protein. | Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.774 |
Lsan_0055 | Lsan_2975 | Lsan_0055 | Lsan_2975 | Hypothetical protein. | Calcium-transporting ATPase. | 0.774 |
Lsan_0055 | Lsan_3956 | Lsan_0055 | Lsan_3956 | Hypothetical protein. | Putative secreted esterase. | 0.774 |
Lsan_0055 | Lsan_4188 | Lsan_0055 | Lsan_4188 | Hypothetical protein. | Hypothetical protein. | 0.774 |
Lsan_0055 | bcp | Lsan_0055 | Lsan_3764 | Hypothetical protein. | Acetylpolyamine aminohydrolase. | 0.772 |
Lsan_0055 | lepB_4 | Lsan_0055 | Lsan_2620 | Hypothetical protein. | Effector protein B, substrate of the Dot/Icm secretion system. | 0.773 |
Lsan_0055 | pieE_2 | Lsan_0055 | Lsan_3286 | Hypothetical protein. | Substrate of the Dot/Icm secretion system. | 0.774 |
Lsan_0055 | yeeA_1 | Lsan_0055 | Lsan_1097 | Hypothetical protein. | Inner membrane protein. | 0.773 |
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