STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lsan_3891Hypothetical protein. (168 aa)    
Predicted Functional Partners:
Lsan_3892
Hypothetical protein.
 
     0.949
Lsan_3890
Bile acid beta-glucosidase.
 
     0.946
Lsan_3898
Hypothetical protein.
 
     0.941
Lsan_1373
Hypothetical protein.
 
     0.775
Lsan_1522
Hypothetical protein.
 
     0.775
Lsan_3888
Hypothetical protein.
       0.775
Lsan_3889
Hypothetical protein.
       0.775
Lsan_1371
Bile acid beta-glucosidase.
 
     0.774
Lsan_1384
Pilus retraction ATPase PilT.
 
     0.774
Lsan_1518
Hypothetical protein.
 
     0.774
Your Current Organism:
Legionella santicrucis
NCBI taxonomy Id: 45074
Other names: ATCC 35301, CCUG 29673, CIP 103849, DSM 23075, JCM 7557, L. santicrucis, Legionella sancticrucis, Legionella santacruxensis, NCTC 11989, strain SC-63-C7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.