Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lsan_1028 | Lsan_4093 | Lsan_1028 | Lsan_4093 | Ada protein (O6-methylguanine-DNA methyltransferase). | DNA-3-methyladenine glycosylase. | 0.834 |
Lsan_1028 | Lsan_4098 | Lsan_1028 | Lsan_4098 | Ada protein (O6-methylguanine-DNA methyltransferase). | Endonuclease/Exonuclease/phosphatase family protein. | 0.400 |
Lsan_1028 | exoA | Lsan_1028 | Lsan_1866 | Ada protein (O6-methylguanine-DNA methyltransferase). | Exodeoxyribonuclease. | 0.400 |
Lsan_1028 | polA | Lsan_1028 | Lsan_1476 | Ada protein (O6-methylguanine-DNA methyltransferase). | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.549 |
Lsan_1028 | surE | Lsan_1028 | Lsan_0322 | Ada protein (O6-methylguanine-DNA methyltransferase). | Acid phosphatase SurE (Stationary phase survival protein); Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.742 |
Lsan_1028 | xapA | Lsan_1028 | Lsan_3590 | Ada protein (O6-methylguanine-DNA methyltransferase). | Xanthosine phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.668 |
Lsan_1028 | xthA | Lsan_1028 | Lsan_1867 | Ada protein (O6-methylguanine-DNA methyltransferase). | Exodeoxyribonuclease III. | 0.400 |
Lsan_4093 | Lsan_1028 | Lsan_4093 | Lsan_1028 | DNA-3-methyladenine glycosylase. | Ada protein (O6-methylguanine-DNA methyltransferase). | 0.834 |
Lsan_4093 | Lsan_4095 | Lsan_4093 | Lsan_4095 | DNA-3-methyladenine glycosylase. | Hypothetical protein. | 0.598 |
Lsan_4093 | Lsan_4098 | Lsan_4093 | Lsan_4098 | DNA-3-methyladenine glycosylase. | Endonuclease/Exonuclease/phosphatase family protein. | 0.891 |
Lsan_4093 | exoA | Lsan_4093 | Lsan_1866 | DNA-3-methyladenine glycosylase. | Exodeoxyribonuclease. | 0.854 |
Lsan_4093 | polA | Lsan_4093 | Lsan_1476 | DNA-3-methyladenine glycosylase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.554 |
Lsan_4093 | rtcB | Lsan_4093 | Lsan_4094 | DNA-3-methyladenine glycosylase. | Replication factor C subunit (activator I); Belongs to the RtcB family. | 0.774 |
Lsan_4093 | surE | Lsan_4093 | Lsan_0322 | DNA-3-methyladenine glycosylase. | Acid phosphatase SurE (Stationary phase survival protein); Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.617 |
Lsan_4093 | xapA | Lsan_4093 | Lsan_3590 | DNA-3-methyladenine glycosylase. | Xanthosine phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.641 |
Lsan_4093 | xthA | Lsan_4093 | Lsan_1867 | DNA-3-methyladenine glycosylase. | Exodeoxyribonuclease III. | 0.854 |
Lsan_4093 | yacG | Lsan_4093 | Lsan_4092 | DNA-3-methyladenine glycosylase. | DNA gyrase inhibitor YacG; Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C- terminal domain of GyrB, which probably disrupts DNA binding by the gyrase. | 0.589 |
Lsan_4095 | Lsan_4093 | Lsan_4095 | Lsan_4093 | Hypothetical protein. | DNA-3-methyladenine glycosylase. | 0.598 |
Lsan_4095 | rtcB | Lsan_4095 | Lsan_4094 | Hypothetical protein. | Replication factor C subunit (activator I); Belongs to the RtcB family. | 0.985 |
Lsan_4095 | yacG | Lsan_4095 | Lsan_4092 | Hypothetical protein. | DNA gyrase inhibitor YacG; Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C- terminal domain of GyrB, which probably disrupts DNA binding by the gyrase. | 0.572 |
page 1 of 3