Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Lsan_4100Polyketide synthase. (3780 aa)    
Predicted Functional Partners:
Lsan_0832
Polyketide synthase.
 
0.999
Lsan_1052
acyl-CoA synthetase.
 
 0.999
Lsan_1292
Non-ribosomal peptide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 0.999
Lsan_2556
Non-ribosomal peptide synthetase/polyketide synthetase.
 
0.999
Lsan_1114
acyl-CoA synthetase.
 
 0.998
rkpA
Type I polyketide synthase WcbR.
 
0.998
aas
Fused 2-acylglycerophospho-ethanolamine acyl transferase, acyl-acyl carrier protein synthetase.
  
 0.990
fabD_1
Malonyl CoA-ACP transacylase.
 0.980
Lsan_4130
Non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 0.979
Lsan_2443
Non-ribosomal peptide synthase.
 
 0.978
Your Current Organism:
Legionella santicrucis
NCBI taxonomy Id: 45074
Other names: ATCC 35301, CCUG 29673, CIP 103849, DSM 23075, JCM 7557, L. santicrucis, Legionella sancticrucis, Legionella santacruxensis, NCTC 11989, strain SC-63-C7
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