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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lwor_0163Protein TraU. (331 aa)    
Predicted Functional Partners:
traH
Protein TraH.
 
   
 0.957
Lwor_0160
Protein TraC.
 
   
 0.955
Lwor_0162
Protein TraW.
 
     0.954
Lwor_0165
Protein TraN.
 
   
 0.953
Lwor_0166
Pilus assembly protein TraF.
 
     0.946
Lwor_0167
Thioredoxin.
 
     0.946
Lwor_0164
Putative conjugative transfer protein TrbC.
 
     0.945
Lwor_0169
Protein TraG.
 
     0.945
Lwor_0156
Putative conjugative transfer protein TraE.
 
     0.943
Lwor_0158
Putative conjugative transfer protein TraB.
 
     0.943
Your Current Organism:
Legionella worsleiensis
NCBI taxonomy Id: 45076
Other names: ATCC 49508, CCUG 44923, CIP 105114, DSM 21907, L. worsleiensis, NCTC 12377
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