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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lwor_0198Hypothetical protein. (341 aa)    
Predicted Functional Partners:
flgD
Flagellar basal body rod modification protein; Required for flagellar hook formation. May act as a scaffolding protein.
    
   0.645
Lwor_2006
Flagellar basal body rod modification protein.
    
   0.645
flgC_1
Flagellar basal body rod protein FlgC.
    
   0.512
flgC_2
Flagellar basal body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
   0.512
Lwor_2313
Hypothetical protein.
    
 0.512
Lwor_0931
D-ribulose-5-phosphate-3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
  
 0.507
pdxB
Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate.
    
 0.507
Lwor_0509
Peptide synthetase, non-ribosomal.
  
  
 0.503
Lwor_0111
HAD-superfamily hydrolase.
    
 0.492
korA
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
     
 0.484
Your Current Organism:
Legionella worsleiensis
NCBI taxonomy Id: 45076
Other names: ATCC 49508, CCUG 44923, CIP 105114, DSM 21907, L. worsleiensis, NCTC 12377
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