Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lwor_0541 | Lwor_0786 | Lwor_0541 | Lwor_0786 | Cation transport ATPase. | Zip family transporter. | 0.493 |
Lwor_0541 | Lwor_1509 | Lwor_0541 | Lwor_1509 | Cation transport ATPase. | Cation transporting ATPase PacS. | 0.999 |
Lwor_0541 | Lwor_2522 | Lwor_0541 | Lwor_2522 | Cation transport ATPase. | Flavin containing monooxygenae. | 0.454 |
Lwor_0541 | copA | Lwor_0541 | Lwor_1623 | Cation transport ATPase. | Copper transporting P-type ATPase. | 0.916 |
Lwor_0541 | czcD | Lwor_0541 | Lwor_0426 | Cation transport ATPase. | Cation efflux system protein. | 0.596 |
Lwor_0786 | Lwor_0541 | Lwor_0786 | Lwor_0541 | Zip family transporter. | Cation transport ATPase. | 0.493 |
Lwor_0786 | Lwor_1509 | Lwor_0786 | Lwor_1509 | Zip family transporter. | Cation transporting ATPase PacS. | 0.493 |
Lwor_0786 | czcD | Lwor_0786 | Lwor_0426 | Zip family transporter. | Cation efflux system protein. | 0.618 |
Lwor_1509 | Lwor_0541 | Lwor_1509 | Lwor_0541 | Cation transporting ATPase PacS. | Cation transport ATPase. | 0.999 |
Lwor_1509 | Lwor_0786 | Lwor_1509 | Lwor_0786 | Cation transporting ATPase PacS. | Zip family transporter. | 0.493 |
Lwor_1509 | Lwor_2522 | Lwor_1509 | Lwor_2522 | Cation transporting ATPase PacS. | Flavin containing monooxygenae. | 0.454 |
Lwor_1509 | copA | Lwor_1509 | Lwor_1623 | Cation transporting ATPase PacS. | Copper transporting P-type ATPase. | 0.916 |
Lwor_1509 | czcD | Lwor_1509 | Lwor_0426 | Cation transporting ATPase PacS. | Cation efflux system protein. | 0.596 |
Lwor_2032 | czcD | Lwor_2032 | Lwor_0426 | Hydrolase/acyltransferase. | Cation efflux system protein. | 0.545 |
Lwor_2522 | Lwor_0541 | Lwor_2522 | Lwor_0541 | Flavin containing monooxygenae. | Cation transport ATPase. | 0.454 |
Lwor_2522 | Lwor_1509 | Lwor_2522 | Lwor_1509 | Flavin containing monooxygenae. | Cation transporting ATPase PacS. | 0.454 |
Lwor_2522 | czcD | Lwor_2522 | Lwor_0426 | Flavin containing monooxygenae. | Cation efflux system protein. | 0.726 |
cca | czcD | Lwor_0423 | Lwor_0426 | tRNA nucleotidyltransferase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases. | Cation efflux system protein. | 0.802 |
cca | engC | Lwor_0423 | Lwor_0422 | tRNA nucleotidyltransferase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases. | EngC GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.630 |
cca | orn | Lwor_0423 | Lwor_0424 | tRNA nucleotidyltransferase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases. | Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family. | 0.863 |
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