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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lwor_0533Putative transmembrane protein. (248 aa)    
Predicted Functional Partners:
Lwor_0534
Putative ABC transport system permease.
  
 0.969
Lwor_0532
Hypothetical protein.
 
     0.953
Lwor_0775
ABC transporter ATP binding protein.
  
 0.885
ttg2A
Toluene tolerance ABC transporter ATP binding protein Ttg2A.
  
 0.885
Lwor_0774
ABC transporter permease.
  
 0.880
ttg2B
Toluene tolerance protein Ttg2B.
  
 0.880
ttg2D
Toluene tolerance protein Ttg2D.
 
 0.844
motB_2
Flagellar motor protein MotD.
   
   0.774
motB_1
Flagellar motor protein MotB.
   
   0.702
Lwor_2536
Putative anti-sigma-B factor antagonist (Anti-anti-sigma-B factor).
  
 0.646
Your Current Organism:
Legionella worsleiensis
NCBI taxonomy Id: 45076
Other names: ATCC 49508, CCUG 44923, CIP 105114, DSM 21907, L. worsleiensis, NCTC 12377
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