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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lwor_0853ABC transporter permease. (298 aa)    
Predicted Functional Partners:
Lwor_0851
Rhodanese domain-containing protein.
       0.807
Lwor_0852
Hypothetical protein.
       0.807
Lwor_0854
Glutamate--cysteine ligase.
       0.586
gshB
Glutathione synthetase; Belongs to the prokaryotic GSH synthase family.
       0.586
pheT
phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
   
   0.453
flgG_1
Flagellar basal body rod protein FlgG; Belongs to the flagella basal body rod proteins family.
    
   0.422
flgF_2
Flagellar basal body rod protein FlgF.
    
   0.422
flgG_2
Flagellar basal body rod protein FlgG.
    
   0.422
pta
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase.
 
   
 0.400
Your Current Organism:
Legionella worsleiensis
NCBI taxonomy Id: 45076
Other names: ATCC 49508, CCUG 44923, CIP 105114, DSM 21907, L. worsleiensis, NCTC 12377
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