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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lwor_0867Zinc binding dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily. (334 aa)    
Predicted Functional Partners:
pksJ
Polyketide synthase, type I.
  
 0.956
Lwor_0289
Polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.939
pta
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase.
  
 0.839
fadB
3-hydroxyacyl CoA dehydrogenase oxidoreductase protein.
  
 0.838
yfcX
Enoyl CoA hydratase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.838
Lwor_0509
Peptide synthetase, non-ribosomal.
  
 
 0.825
Lwor_0282
Peptide synthetase, non-ribosomal; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.812
Lwor_2197
Non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.810
fabD_2
Malonyl CoA-ACP transacylase.
    
 0.809
Lwor_1091
Xylene monooxygenase.
     
 0.779
Your Current Organism:
Legionella worsleiensis
NCBI taxonomy Id: 45076
Other names: ATCC 49508, CCUG 44923, CIP 105114, DSM 21907, L. worsleiensis, NCTC 12377
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