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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lwor_0938SAM-dependent O-methyltransferase. (219 aa)    
Predicted Functional Partners:
phaB
Acetyoacetyl CoA reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
   0.905
phaB2
Acetyoacetyl CoA reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
   0.825
fabG_1
3-oxoacyl-ACP reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
   0.822
Lwor_0937
Glu/Leu/Phe/Val dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
       0.784
Lwor_1573
Acetyoacetyl CoA reductase.
 
  
   0.761
Lwor_0939
4-hydroxyphenylpyruvate dioxygenase.
  
  
 0.756
Lwor_0940
Fumarylacetoacetate hydrolase.
     
 0.732
Lwor_0941
Glutathione S-transferase.
   
   0.732
pksJ
Polyketide synthase, type I.
  
 0.689
Lwor_1640
Cytochrome P450.
   
 
 0.645
Your Current Organism:
Legionella worsleiensis
NCBI taxonomy Id: 45076
Other names: ATCC 49508, CCUG 44923, CIP 105114, DSM 21907, L. worsleiensis, NCTC 12377
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