Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lwor_0972Interaptin. (872 aa)    
Predicted Functional Partners:
Lwor_0281
Sensory histidine-kinase / response regulator.
   
 0.946
Lwor_0290
Sensory box histidine kinase/response regulator.
   
 0.946
Lwor_1015
Sensory histidine-kinase / response regulator.
   
 0.946
Lwor_1937
Sensory box protein.
   
 0.909
Lwor_2319
Chemotaxis signal transducer.
   
  0.901
gacS/letS
Transmission sensor LetS.
   
  0.896
Lwor_1174
Response regulator.
   
  0.879
Lwor_1108
GGDEF domain-containing sensory box protein.
    
  0.851
Lwor_1687
Regulatory protein (GGDEF and EAL domains).
    
 0.842
Lwor_1947
Inner membrane protein.
    
 0.842
Your Current Organism:
Legionella worsleiensis
NCBI taxonomy Id: 45076
Other names: ATCC 49508, CCUG 44923, CIP 105114, DSM 21907, L. worsleiensis, NCTC 12377
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