comF protein (Legionella worsleiensis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

comF

Competence protein ComF. (237 aa)

Predicted Functional Partners:

smf

0.955

comA

0.937

radC

0.912

Lwor_2421

0.844

comM

0.834

Lwor_1687

0.830

Lwor_1947

0.830

flgC_1

0.805

flgC_2

0.805

Lwor_0765

0.766

Your Current Organism:

Legionella worsleiensis

NCBI taxonomy Id: 45076
Other names: ATCC 49508, CCUG 44923, CIP 105114, DSM 21907, L. worsleiensis, NCTC 12377

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Lwor_0765	Lwor_2421	Lwor_0765	Lwor_2421	Phage integrase; Belongs to the 'phage' integrase family.	ABC transporter of LPS O-antigen.	0.405
Lwor_0765	comF	Lwor_0765	Lwor_0989	Phage integrase; Belongs to the 'phage' integrase family.	Competence protein ComF.	0.766
Lwor_1687	Lwor_1947	Lwor_1687	Lwor_1947	Regulatory protein (GGDEF and EAL domains).	Inner membrane protein.	0.998
Lwor_1687	comA	Lwor_1687	Lwor_2356	Regulatory protein (GGDEF and EAL domains).	DNA uptake/competence protein ComA.	0.536
Lwor_1687	comF	Lwor_1687	Lwor_0989	Regulatory protein (GGDEF and EAL domains).	Competence protein ComF.	0.830
Lwor_1687	flgC_1	Lwor_1687	Lwor_1906	Regulatory protein (GGDEF and EAL domains).	Flagellar basal body rod protein FlgC.	0.574
Lwor_1687	flgC_2	Lwor_1687	Lwor_1998	Regulatory protein (GGDEF and EAL domains).	Flagellar basal body rod protein FlgC; Belongs to the flagella basal body rod proteins family.	0.574
Lwor_1687	radC	Lwor_1687	Lwor_1658	Regulatory protein (GGDEF and EAL domains).	DNA repair protein RadC; Belongs to the UPF0758 family.	0.664
Lwor_1687	smf	Lwor_1687	Lwor_1839	Regulatory protein (GGDEF and EAL domains).	Protein smf.	0.755
Lwor_1947	Lwor_1687	Lwor_1947	Lwor_1687	Inner membrane protein.	Regulatory protein (GGDEF and EAL domains).	0.998
Lwor_1947	comA	Lwor_1947	Lwor_2356	Inner membrane protein.	DNA uptake/competence protein ComA.	0.536
Lwor_1947	comF	Lwor_1947	Lwor_0989	Inner membrane protein.	Competence protein ComF.	0.830
Lwor_1947	flgC_1	Lwor_1947	Lwor_1906	Inner membrane protein.	Flagellar basal body rod protein FlgC.	0.574
Lwor_1947	flgC_2	Lwor_1947	Lwor_1998	Inner membrane protein.	Flagellar basal body rod protein FlgC; Belongs to the flagella basal body rod proteins family.	0.574
Lwor_1947	radC	Lwor_1947	Lwor_1658	Inner membrane protein.	DNA repair protein RadC; Belongs to the UPF0758 family.	0.664
Lwor_1947	smf	Lwor_1947	Lwor_1839	Inner membrane protein.	Protein smf.	0.755
Lwor_2421	Lwor_0765	Lwor_2421	Lwor_0765	ABC transporter of LPS O-antigen.	Phage integrase; Belongs to the 'phage' integrase family.	0.405
Lwor_2421	comF	Lwor_2421	Lwor_0989	ABC transporter of LPS O-antigen.	Competence protein ComF.	0.844
comA	Lwor_1687	Lwor_2356	Lwor_1687	DNA uptake/competence protein ComA.	Regulatory protein (GGDEF and EAL domains).	0.536
comA	Lwor_1947	Lwor_2356	Lwor_1947	DNA uptake/competence protein ComA.	Inner membrane protein.	0.536