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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lwor_1045IcmH (DotU). (261 aa)    
Predicted Functional Partners:
Lwor_1044
IcmF.
 
 
 0.983
Lwor_0502
Protein IcmE (DotG).
 
    0.735
ubiC
4-hydroxybenzoate synthetase.
  
     0.667
Lwor_0151
Protein LvrA.
  
     0.653
Lwor_1849
Cysteine protease.
  
     0.638
Lwor_1558
Putative membrane protein YdgA-like protein.
  
     0.635
Lwor_2290
Hypothetical protein.
  
     0.608
lptC
Lipopolysaccharide export system protein LptC.
  
     0.601
ung
Uracil DNA glycosylase.
  
     0.594
Lwor_2087
Hypothetical protein.
  
     0.578
Your Current Organism:
Legionella worsleiensis
NCBI taxonomy Id: 45076
Other names: ATCC 49508, CCUG 44923, CIP 105114, DSM 21907, L. worsleiensis, NCTC 12377
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.