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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lwor_1071Peptidase, M23/M37 family. (379 aa)    
Predicted Functional Partners:
ftsX
Cell division ATP transporter FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 
 0.982
Lwor_1929
Zn-dependent protease.
 
 
   0.904
ctpA
Carboxy-terminal protease; Belongs to the peptidase S41A family.
  
    0.871
gpmI
Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
       0.807
Lwor_0300
Hypothetical protein.
  
   
 0.799
amiB
N-acetylmuramoyl-L-alanine amidase.
 
   
 0.764
Lwor_2516
Peptidase, M23/M37 family.
  
   
 0.756
Lwor_1583
M23/M37 family transporter peptidase.
  
   
 0.718
Lwor_1937
Sensory box protein.
    
  0.666
Lwor_1174
Response regulator.
  
  
  0.629
Your Current Organism:
Legionella worsleiensis
NCBI taxonomy Id: 45076
Other names: ATCC 49508, CCUG 44923, CIP 105114, DSM 21907, L. worsleiensis, NCTC 12377
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