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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yraODnaA initiator-associating factor for replication initiation. (199 aa)    
Predicted Functional Partners:
Lwor_0864
D,D-heptose 1,7-bisphosphate phosphatase.
 
 
 0.991
dnaA
Chromosome replication initiator DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
    
 
 0.889
Lwor_1205
Periplasmic protein.
  
    0.872
Lwor_1203
Hypothetical protein; Belongs to the UPF0102 family.
  
  
 0.802
Lwor_1206
Hemolysin, lipoprotein.
  
    0.800
Lwor_1506
Heptosyl transferase, glycosyltransferase family 9 protein.
 
  
 0.794
hda
ATPase regulatory factor involved in DnaA inactivation; Belongs to the DnaA family. HdA subfamily.
    
 
 0.749
Lwor_1202
Lipoprotein.
  
    0.708
Lwor_2002
Flagellar assembly protein H.
   
   0.650
fliH
Polar flagellar assembly protein FliH.
   
   0.650
Your Current Organism:
Legionella worsleiensis
NCBI taxonomy Id: 45076
Other names: ATCC 49508, CCUG 44923, CIP 105114, DSM 21907, L. worsleiensis, NCTC 12377
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