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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lwor_1260Outer membrane efflux protein. (540 aa)    
Predicted Functional Partners:
Lwor_1261
Membrane-fusion protein AcrA.
 
  0.980
Lwor_1263
ABC transporter permease.
 
 
 
 0.959
Lwor_1262
ABC transporter ATP-binding protein.
 
 
   0.909
Lwor_1258
Putative helicase/relaxase.
 
   
 0.908
acrA
Acriflavin resistance protein E; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.787
Lwor_1316
Hypothetical protein.
  
     0.771
iraA
Small-molecule methyltransferase IraA.
  
     0.768
Lwor_0830
Hemolysin D.
  
  0.767
Lwor_0210
Putative membrane fusion protein.
  
  0.765
Lwor_1606
Hemolysin D.
  
  0.763
Your Current Organism:
Legionella worsleiensis
NCBI taxonomy Id: 45076
Other names: ATCC 49508, CCUG 44923, CIP 105114, DSM 21907, L. worsleiensis, NCTC 12377
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