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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lwor_1601Hypothetical protein. (196 aa)    
Predicted Functional Partners:
lasB
Class 4 metalloprotease; Extracellular zinc metalloprotease.
 
 
 0.849
Lwor_0801
Serine metalloprotease; Belongs to the peptidase S8 family.
   
  0.765
ftsK
Cell division protein FtsK.
    
   0.750
ctpA
Carboxy-terminal protease; Belongs to the peptidase S41A family.
   
   0.686
Lwor_1599
Hypothetical protein.
  
 
 
0.629
tesA
Esterase TesA precursor.
    
  0.595
parA
Sporulation initiation inhibitor protein Soj.
    
   0.578
Lwor_0289
Polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
   0.574
Lwor_2197
Non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 
 0.565
rpoE
Sigma factor RpoE (sigma 24); Belongs to the sigma-70 factor family. ECF subfamily.
    
  0.543
Your Current Organism:
Legionella worsleiensis
NCBI taxonomy Id: 45076
Other names: ATCC 49508, CCUG 44923, CIP 105114, DSM 21907, L. worsleiensis, NCTC 12377
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