Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lwor_1725 | nadA | Lwor_1725 | Lwor_2488 | Nicotinamide mononucleotide transporter. | Quinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | 0.903 |
Lwor_1725 | nadB | Lwor_1725 | Lwor_2489 | Nicotinamide mononucleotide transporter. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.712 |
Lwor_1725 | uspA_2 | Lwor_1725 | Lwor_1726 | Nicotinamide mononucleotide transporter. | Universal stress protein A. | 0.570 |
nadA | Lwor_1725 | Lwor_2488 | Lwor_1725 | Quinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | Nicotinamide mononucleotide transporter. | 0.903 |
nadA | nadB | Lwor_2488 | Lwor_2489 | Quinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.999 |
nadB | Lwor_1725 | Lwor_2489 | Lwor_1725 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | Nicotinamide mononucleotide transporter. | 0.712 |
nadB | nadA | Lwor_2489 | Lwor_2488 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | Quinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | 0.999 |
uspA_2 | Lwor_1725 | Lwor_1726 | Lwor_1725 | Universal stress protein A. | Nicotinamide mononucleotide transporter. | 0.570 |