close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yghDPutative general secretion pathway protein YghD. (156 aa)    
Predicted Functional Partners:
Lwor_1980
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.997
Lwor_2582
General secretion pathway protein C.
 
   
 0.851
lspI
Type II secretory pathway protein LspI.
 
   
 0.832
lspK
Type II secretory pathway protein.
 
  
 0.829
lspJ
Type II secretory pathway protein LspJ.
 
  
 0.829
Lwor_0353
General secretion pathway protein LspH.
 
   
 0.791
Lwor_0151
Protein LvrA.
  
     0.734
lspD
Type II protein secretion LspD.
 
  
 0.724
iraA
Small-molecule methyltransferase IraA.
  
     0.687
Lwor_1558
Putative membrane protein YdgA-like protein.
  
     0.678
Your Current Organism:
Legionella worsleiensis
NCBI taxonomy Id: 45076
Other names: ATCC 49508, CCUG 44923, CIP 105114, DSM 21907, L. worsleiensis, NCTC 12377
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.