Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lwor_2012RasGEF domain protein. (984 aa)    
Predicted Functional Partners:
Lwor_2135
SET domain protein.
  
 
  0.879
flgB_2
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
     0.846
Lwor_1874
Thaumatin domain-containing protein.
  
 
  0.814
rhsA
Putative deoxyribonuclease RhsA.
  
    0.770
Lwor_2466
Leucine Rich repeats (2 copies).
  
     0.770
Lwor_0866
Hypothetical protein.
  
     0.769
Lwor_2465
AAA domain (dynein-related subfamily).
  
     0.768
Lwor_0242
Ninein.
  
     0.766
smc_2
Chromosome partition protein Smc.
  
     0.766
Lwor_2586
Putative asmA protein.
  
     0.759
Your Current Organism:
Legionella worsleiensis
NCBI taxonomy Id: 45076
Other names: ATCC 49508, CCUG 44923, CIP 105114, DSM 21907, L. worsleiensis, NCTC 12377
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