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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lwor_2438Spore coat polysaccharide biosynthesis protein E. (362 aa)    
Predicted Functional Partners:
neuA_2
CMP-N-acetlyneuraminic acid synthetase.
 
 0.966
neuA_1
CMP-N-acetlyneuraminic acid synthetase.
 
 
 0.875
neuA_3
CMP-N-acetlyneuraminic acid synthetase.
 
 
 0.875
neuC
N-acylglucosamine 2-epimerase.
 
 
 0.843
Lwor_2439
Serine/threonine protein kinase.
       0.806
Lwor_2440
Hypothetical protein.
       0.805
Lwor_2435
LPS biosynthesis protein, PseA-like protein.
 
     0.783
Lwor_2437
Putative Methyltransferase.
       0.765
Lwor_2530
Hydrolase; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family.
  
 0.578
Lwor_2441
Hypothetical protein.
       0.570
Your Current Organism:
Legionella worsleiensis
NCBI taxonomy Id: 45076
Other names: ATCC 49508, CCUG 44923, CIP 105114, DSM 21907, L. worsleiensis, NCTC 12377
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