STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHZ_c0066Putative HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (344 aa)    
Predicted Functional Partners:
PHZ_c0065
AcrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.966
PHZ_c0070
Conserved hypothetical protein.
 
   
 0.863
PHZ_c0068
Sulfide-quinone reductase.
 
     0.795
PHZ_c0067
Rhodanese-related sulfurtransferase.
     
 0.778
PHZ_c0064
Transcriptional regulator, ArsR family.
       0.727
PHZ_c0069
Thioredoxin.
 
     0.576
PHZ_c1187
AcrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.551
PHZ_c0974
Multidrug-efflux system, acriflavin resistance protein.
 
 
 0.545
PHZ_c1078
Cation/multidrug efflux pump.
 
 
 0.518
PHZ_c0882
HlyD family secretion protein.
 
  
 0.497
Your Current Organism:
Phenylobacterium zucineum
NCBI taxonomy Id: 450851
Other names: P. zucineum HLK1, Phenylobacterium zucineum HLK1, Phenylobacterium zucineum str. HLK1, Phenylobacterium zucineum strain HLK1
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