STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHZ_c0295Conserved hypothetical protein. (69 aa)    
Predicted Functional Partners:
cysQ
Protein cysQ; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.
       0.732
PHZ_c3467
Conserved hypothetical protein.
  
     0.661
PHZ_c2851
Transcriptional regulator, MarR family.
  
     0.610
PHZ_c0296
Conserved hypothetical protein.
       0.603
PHZ_c3516
Conserved hypothetical protein.
  
     0.541
gltD
Glutamate synthase, small subunit.
  
     0.502
PHZ_c3285
Conserved hypothetical protein.
  
     0.489
cheYIV
Chemotaxis protein CheYIV.
       0.430
cheR
Chemotaxis protein methyltransferase CheR.
       0.428
PHZ_c0897
Conserved hypothetical protein.
  
     0.422
Your Current Organism:
Phenylobacterium zucineum
NCBI taxonomy Id: 450851
Other names: P. zucineum HLK1, Phenylobacterium zucineum HLK1, Phenylobacterium zucineum str. HLK1, Phenylobacterium zucineum strain HLK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.