STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHZ_c0306Conserved hypothetical protein. (288 aa)    
Predicted Functional Partners:
PHZ_c0307
3',5'-cyclic-nucleotide phosphodiesterase.
 
     0.872
PHZ_c1408
Conserved hypothetical protein.
 
     0.769
PHZ_c3486
Conserved hypothetical protein.
 
 
 
 0.725
PHZ_c0017
Conserved hypothetical protein.
  
     0.666
PHZ_c2254
Conserved hypothetical protein.
  
     0.626
PHZ_c3098
Autotransporter.
 
     0.605
PHZ_c1771
Conserved hypothetical protein.
  
     0.602
PHZ_c1618
Response regulator.
 
     0.591
PHZ_c2173
TonB-dependent receptor.
  
     0.555
groEL
Heat shock protein chaperonin, HSP60; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
    
 0.554
Your Current Organism:
Phenylobacterium zucineum
NCBI taxonomy Id: 450851
Other names: P. zucineum HLK1, Phenylobacterium zucineum HLK1, Phenylobacterium zucineum str. HLK1, Phenylobacterium zucineum strain HLK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.