STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rsaDRsaA secretion system, ATP-binding protein RsaD. (576 aa)    
Predicted Functional Partners:
rsaE
RsaA secretion system, membrane protein RsaE rsaE.
  
 0.947
pstB
Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.899
potG
Spermidine/putrescine ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     
0.899
PHZ_c0490
Hemolysin-type calcium-binding region protein.
 
 
 0.822
PHZ_c3294
Alkaline metalloproteinase.
 
 
 0.785
PHZ_c1915
Hemolysin-type calcium-binding region protein.
 
 
 0.772
PHZ_c1467
Hypothetical protein.
 
 
 0.762
PHZ_c2655
Hypothetical protein.
 
 
 0.761
PHZ_c0364
Hypothetical protein.
 
 
 0.759
PHZ_c1862
Hypothetical protein.
 
 
 0.759
Your Current Organism:
Phenylobacterium zucineum
NCBI taxonomy Id: 450851
Other names: P. zucineum HLK1, Phenylobacterium zucineum HLK1, Phenylobacterium zucineum str. HLK1, Phenylobacterium zucineum strain HLK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.