STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHZ_c0556Putative Amidohydrolase. (393 aa)    
Predicted Functional Partners:
PHZ_c2110
Conserved hypothetical protein.
  
     0.719
PHZ_c1845
NADPH-dependent glutamate synthase beta chain; Similar to related.
  
     0.632
PHZ_c0555
DNA-3-methyladenine glycosylase; Belongs to the DNA glycosylase MPG family.
       0.572
PHZ_c0809
Conserved hypothetical protein.
 
     0.539
PHZ_c2522
Conserved hypothetical protein.
 
     0.508
PHZ_c0672
Transcriptional regulator, TetR family.
  
     0.507
PHZ_c1133
Luciferase-like protein.
 
   
 0.497
PHZ_c2240
Putative sphingosine-1-phosphate lyase.
  
    0.492
PHZ_c1939
Putative phenylacetic acid degradation-related protein.
 
     0.474
PHZ_c3048
IMP dehydrogenase/GMP reductase:VWA containing CoxE-like protein.
  
     0.471
Your Current Organism:
Phenylobacterium zucineum
NCBI taxonomy Id: 450851
Other names: P. zucineum HLK1, Phenylobacterium zucineum HLK1, Phenylobacterium zucineum str. HLK1, Phenylobacterium zucineum strain HLK1
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