STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
petEPlastocyanin. (147 aa)    
Predicted Functional Partners:
PHZ_c0614
Multicopper oxidase; Belongs to the multicopper oxidase family.
 
 
 
 0.868
PHZ_c0618
Transcriptional regulator, Crp/Fnr family.
 
   
 0.650
copA
Copper-resistance protein A; CopA.
   
 
 0.630
PHZ_c1476
Copper-binding protein.
   
 
 0.630
PHZ_c0616
Conserved hypothetical protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.
       0.499
PHZ_c0215
Ferredoxin, 2Fe-2S.
   
 
 0.447
PHZ_c0621
Uncharacterized protein involved in response to NO.
 
    0.440
Your Current Organism:
Phenylobacterium zucineum
NCBI taxonomy Id: 450851
Other names: P. zucineum HLK1, Phenylobacterium zucineum HLK1, Phenylobacterium zucineum str. HLK1, Phenylobacterium zucineum strain HLK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.