STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHZ_c1049Conserved hypothetical protein. (131 aa)    
Predicted Functional Partners:
PHZ_c1048
Hypothetical protein.
 
     0.951
PHZ_c1050
Hypothetical protein.
 
     0.951
PHZ_c0310
Conserved hypothetical protein.
  
  
 0.734
PHZ_c1822
Conserved hypothetical protein.
 
     0.727
PHZ_c0829
Ribonuclease RNase BN (RBN) transmembrane protein.
 
     0.682
PHZ_c1615
Ribonuclease BN.
 
     0.647
PHZ_c0282
Conserved hypothetical membrane protein.
  
     0.492
coq7
Ubiquinone biosynthesis protein COQ7; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.
  
    0.491
PHZ_c1047
Aminopeptidase.
       0.482
PHZ_c0775
Putative lipoprotein.
   
    0.431
Your Current Organism:
Phenylobacterium zucineum
NCBI taxonomy Id: 450851
Other names: P. zucineum HLK1, Phenylobacterium zucineum HLK1, Phenylobacterium zucineum str. HLK1, Phenylobacterium zucineum strain HLK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.