STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHZ_c1171acyl-CoA dehydrogenase family protein. (389 aa)    
Predicted Functional Partners:
gcdH
glutaryl-CoA dehydrogenase.
     
 
0.900
PHZ_c1574
acetyl-CoA acetyltransferase.
  0.888
PHZ_c3245
acetyl-CoA acyltransferase.
 
  0.825
PHZ_c2525
Thiolase family protein; Belongs to the thiolase-like superfamily. Thiolase family.
 
  0.800
PHZ_c1170
D-amino acid oxidase family protein.
    
  0.799
PHZ_c3300
enoyl-CoA hydratase/isomerase.
  
  0.784
PHZ_c3328
enoyl-CoA hydratase/isomerase family protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  0.784
PHZ_c1748
enoyl-CoA hydratase/carnithine racemase.
  
  0.783
PHZ_c0760
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.755
PHZ_c3218
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.755
Your Current Organism:
Phenylobacterium zucineum
NCBI taxonomy Id: 450851
Other names: P. zucineum HLK1, Phenylobacterium zucineum HLK1, Phenylobacterium zucineum str. HLK1, Phenylobacterium zucineum strain HLK1
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