Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PHZ_c1294 | PHZ_c1295 | PHZ_c1294 | PHZ_c1295 | Putative chromosome partitioning protein. | dnaJ-class molecular chaperone. | 0.786 |
| PHZ_c1295 | PHZ_c1294 | PHZ_c1295 | PHZ_c1294 | dnaJ-class molecular chaperone. | Putative chromosome partitioning protein. | 0.786 |
| PHZ_c1295 | PHZ_c3417 | PHZ_c1295 | PHZ_c3417 | dnaJ-class molecular chaperone. | Heat shock protein Hsp70. | 0.810 |
| PHZ_c1295 | dnaK | PHZ_c1295 | PHZ_c0055 | dnaJ-class molecular chaperone. | Heat shock protein Hsp70; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.810 |
| PHZ_c1295 | rplC | PHZ_c1295 | PHZ_c1230 | dnaJ-class molecular chaperone. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.734 |
| PHZ_c1295 | rplK | PHZ_c1295 | PHZ_c1214 | dnaJ-class molecular chaperone. | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.742 |
| PHZ_c1295 | rplM | PHZ_c1295 | PHZ_c1653 | dnaJ-class molecular chaperone. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.741 |
| PHZ_c1295 | rplN | PHZ_c1295 | PHZ_c1240 | dnaJ-class molecular chaperone. | Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.737 |
| PHZ_c1295 | rplO | PHZ_c1295 | PHZ_c1249 | dnaJ-class molecular chaperone. | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.740 |
| PHZ_c1295 | rplQ | PHZ_c1295 | PHZ_c1255 | dnaJ-class molecular chaperone. | 50S ribosomal protein L17. | 0.753 |
| PHZ_c1295 | sodB | PHZ_c1295 | PHZ_c1092 | dnaJ-class molecular chaperone. | Superoxide dismutase (fe); Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.712 |
| PHZ_c3417 | PHZ_c1295 | PHZ_c3417 | PHZ_c1295 | Heat shock protein Hsp70. | dnaJ-class molecular chaperone. | 0.810 |
| PHZ_c3417 | rplC | PHZ_c3417 | PHZ_c1230 | Heat shock protein Hsp70. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.533 |
| PHZ_c3417 | rplK | PHZ_c3417 | PHZ_c1214 | Heat shock protein Hsp70. | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.444 |
| PHZ_c3417 | rplM | PHZ_c3417 | PHZ_c1653 | Heat shock protein Hsp70. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.585 |
| PHZ_c3417 | rplN | PHZ_c3417 | PHZ_c1240 | Heat shock protein Hsp70. | Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.654 |
| dnaK | PHZ_c1295 | PHZ_c0055 | PHZ_c1295 | Heat shock protein Hsp70; Acts as a chaperone; Belongs to the heat shock protein 70 family. | dnaJ-class molecular chaperone. | 0.810 |
| dnaK | rplC | PHZ_c0055 | PHZ_c1230 | Heat shock protein Hsp70; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.607 |
| dnaK | rplK | PHZ_c0055 | PHZ_c1214 | Heat shock protein Hsp70; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.450 |
| dnaK | rplM | PHZ_c0055 | PHZ_c1653 | Heat shock protein Hsp70; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.600 |
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