STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutCHistidine utilization repressor. (244 aa)    
Predicted Functional Partners:
hutF
Formiminoglutamate deiminase.
  
 0.846
hutI
Imidazolone-5-propionate hydrolase.
 
  
 0.738
hutG
Formylglutamate amidohydrolase.
 
  
 0.711
hutH
Histidine ammonia-lyase; Belongs to the PAL/histidase family.
 
  
 0.668
PHZ_c1484
Conserved hypothetical protein.
 
     0.668
PHZ_c1482
TonB-dependent receptor.
 
   
 0.664
PHZ_c1483
Conserved hypothetical protein.
 
     0.662
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
  
 0.642
PHZ_c2562
Transcriptional regulator, GntR family.
  
  
 0.543
PHZ_c2586
Cupin 2, conserved barrel.
  
  
 0.528
Your Current Organism:
Phenylobacterium zucineum
NCBI taxonomy Id: 450851
Other names: P. zucineum HLK1, Phenylobacterium zucineum HLK1, Phenylobacterium zucineum str. HLK1, Phenylobacterium zucineum strain HLK1
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