STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHZ_c2024Esterase; Serine hydrolase involved in the detoxification of formaldehyde. (278 aa)    
Predicted Functional Partners:
PHZ_c2025
Alcohol dehydrogenase, class III; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
 0.999
adhI
Alcohol dehydrogenase class III.
 0.996
PHZ_c1698
Glutamate synthase (NADPH) small chain.
  
 
  0.902
PHZ_c1054
Conserved hypothetical protein.
  
  
 0.709
lipA
Lipoic acid synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
 
      0.695
PHZ_c2026
Hypothetical protein.
     
 0.604
fdh
Glutathione-dependent formaldehyde dehydrogenase.
  
 
 0.566
PHZ_c2027
Conserved hypothetical protein.
       0.441
Your Current Organism:
Phenylobacterium zucineum
NCBI taxonomy Id: 450851
Other names: P. zucineum HLK1, Phenylobacterium zucineum HLK1, Phenylobacterium zucineum str. HLK1, Phenylobacterium zucineum strain HLK1
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