STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHZ_c2045Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (318 aa)    
Predicted Functional Partners:
PHZ_c2046
Chorismate mutase.
     
 0.722
PHZ_c1392
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.713
PHZ_c2521
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.681
PHZ_c1463
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.675
PHZ_c2377
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.649
cysI
Sulfite reductase (NADPH) hemoprotein beta-component.
     
 0.535
gltB
Glutamate synthase, large subunit.
     
 0.529
cysH
Phospho-adenylylsulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
     
 0.529
PHZ_c2044
Sirohaem synthase.
       0.511
PHZ_c2041
Conserved hypothetical protein.
       0.510
Your Current Organism:
Phenylobacterium zucineum
NCBI taxonomy Id: 450851
Other names: P. zucineum HLK1, Phenylobacterium zucineum HLK1, Phenylobacterium zucineum str. HLK1, Phenylobacterium zucineum strain HLK1
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