STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHZ_c2051Conserved hypothetical protein. (281 aa)    
Predicted Functional Partners:
PHZ_c2050
acyl-CoA synthetase.
  
 0.939
PHZ_c2052
Acyl carrier protein.
 
   
 0.854
PHZ_c2053
Aminotransferase, class II.
  
 0.847
PHZ_c2049
Putative membrane protein involved in the export of O-antigen and teichoic acid.
 
  
 0.835
PHZ_c2061
Conserved hypothetical protein.
 
  
 0.776
PHZ_c2056
Conserved hypothetical protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
   
 0.762
PHZ_c2055
Conserved hypothetical protein.
 
     0.744
PHZ_c2054
Conserved hypothetical protein.
  
     0.729
rpsS
30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
   
  0.703
rpsN
Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
   
  0.703
Your Current Organism:
Phenylobacterium zucineum
NCBI taxonomy Id: 450851
Other names: P. zucineum HLK1, Phenylobacterium zucineum HLK1, Phenylobacterium zucineum str. HLK1, Phenylobacterium zucineum strain HLK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.