STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHZ_c2076Beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. (429 aa)    
Predicted Functional Partners:
PHZ_c3139
Alpha-glucosyltransferase.
  
 
 0.920
celD
1,4-beta-D-glucan glucohydrolase D.
    
 0.915
PHZ_c2929
Glucan 1,4-beta-glucosidase.
    
 0.915
PHZ_c2077
Putative galactose mutarotase; Similar to related.
  
  
 0.818
PHZ_c2068
UDP-galactopyranose mutase.
     0.775
PHZ_c0451
Putative 6-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
  
  
 0.738
PHZ_c1059
Conserved hypothetical protein.
  
     0.548
PHZ_c0852
Short-chain dehydrogenase/reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.471
PHZ_c1276
Conserved hypothetical protein.
  
     0.454
PHZ_c1134
DNA topoisomerase IB.
  
   
 0.441
Your Current Organism:
Phenylobacterium zucineum
NCBI taxonomy Id: 450851
Other names: P. zucineum HLK1, Phenylobacterium zucineum HLK1, Phenylobacterium zucineum str. HLK1, Phenylobacterium zucineum strain HLK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.